Journal Search Engine

Download PDF Export Citation Korean Bibliography
ISSN : 1226-9999(Print)
ISSN : 2287-7851(Online)
Korean J. Environ. Biol. Vol.43 No.3 pp.236-241
DOI : https://doi.org/10.11626/KJEB.2025.43.3.236

First report of the green alga Basicladia okamurae (Cladophorales, Chlorophyta) from Korea

Eun-Young Lee, Eun-Young Lee, Soon Jeong Lee1, Sang-Rae Lee2*
Species Diversity Research Division, National Institute of Biological Resources, Incheon 22689, Republic of Korea
1Tongyeong Regional Office, National Fishery Products Quality Management Service (NFQS), Tongyeong 53019, Republic of Korea
2Marine Research Institute, Pusan National University, Busan 46241, Republic of Korea
*Corresponding author Sang-Rae Lee Tel. 051-510-1774 E-mail. antithamnion@gmail.com

†These authors contributed equally to this work.


Contribution to Environmental Biology


▪ This study aims to represent the taxonomic entity of previously unrecorded green algal species that have not been reported in Korea.


▪ The morphological and molecular characteristics for the identification of Basicladia okamurae (Cladophorales, Chlorophyta) were provided.

25/06/2025 19/08/2025 27/08/2025

Abstract


In this study, we report the first occurrence of the filamentous green macroalga Basicladia okamurae (Cladophorales, Chlorophyta) from Korea. This species was originally described as Chaetomorpha okamurae by Ueda in 1932 in Japan and was later transferred to the genus Basicladia. Basicladia okamurae (Ueda) Garbary 2010 has also been found in China and the Netherlands, supported by morphological and molecular evidence. We collected several filamentous green algal individuals from the freshwater stream Sanhocheon (Changwon-si, Republic of Korea) and identified the species as B. okamurae based on morphological characteristics and nuclear ribosomal large subunit (LSU) rDNA sequence analysis. The LSU rDNA sequences of the Korean B. okamurae exhibited 99.8-100% similarity with those of B. okamurae deposited in GenBank (NCBI) and could be distinguished from other species in the order Cladophorales, which showed less than 91.2% similarity. Based on this morphological and molecular evidence, we confirm the species identification as an unrecorded B. okamurae (Ueda) Garbary.



초록


    1. INTRODUCTION

    The genus Basicladia, established by Hoffman and Tilden (1930), could be characterized by unbranched or rarely branched filaments, growing from coalesced rhizoidal holdfast, epiphytic on the back of freshwater turtles (Hoffman and Tilden 1930;Van den Hoek 1963). Although Basicladia had been known for occurring on the back of freshwater turtles at first, later it has also been reported on further various substrates including the shell of snail or even as a free-living algal species (Ueda 1932;Normandin and Taft 1959;Van den Hoek 1963).

    Basicladia okamurae (Ueda) Garbary 2010 is a freshwater green filamentous alga established based on a Japanese specimen as a basionym of Chaetomorpha okamuraeUeda 1932. Ueda (1932) described that this species has pale to deep green cylindrical, and 50-60 μm thick segments with short barrel-shaped cell, distinguished from other freshwater species by branched and fibrous attachments. Garbary (2010) transferred two species, Cladophora kosterae and C. okamurae, to the genus Basicladia. Basicladia kosterae (C. Hoek) Garbary comb. nov. was taxonomically treated as a synonym of Arnoldiella kosterae (Hoek) Boedeker (Boedeker et al. 2012) Therefore, two species (B. okamurae and B. ramulosa) are listed in the genus Basicladia (Guiry and Guiry 2025). This species reportedly occurs in Japan (Ueda 1932;Hanyuda et al. 2002;Watanabe et al. 2025), China (Boedeker et al. 2012), the Netherlands (Van den Hoek 1963;Boedeker et al. 2012), France (Van den Hoek 1963), and Mexico (Pedroche and Sentíes 2020). Cladophoralean species display high morphological similarity and are frequently misidentified based solely on morphological characteristics (Lee et al. 2023). Therefore, DNA barcoding is an essential tool for the species identification of filamentous green algae (e.g. Taylor et al. 2017;Lee et al. 2023).

    In this study, we investigated filaments of B. okamurae isolated from a lump of threads and mucilage, and conducted morphological and DNA barcoding methods to identify the species. Boedeker et al. (2012) and Watanabe et al. (2025) analyzed the phylogenetic relationship among species of the family Pithophoraceae including Basicladia okamurae with SSU rDNA and LSU rDNA from Netherlands, China and Japan. Therefore, we used those LSU rDNA as DNA references to identify Korean samples because of LSU rDNA sequence showing appropriate genetic variation on the species level of the family Pithophoraceae.

    2. MATERIALS AND METHODS

    During the examination of an unidentified sample collected from a river, Sanhocheon, Changwon-si, Gyeongsangnam-do, Korea (35.228140N, 128.584652E; 21 Nov. 2024) for species identification, we isolated an algal specimen morphologically similar to Cladophoralean algae. The sample was predominantly composed of grayish-white fungal mycelial aggregates, along with a few strands of green filamentous algae (Fig. 1). For the morphological observations, we used a light microscope (Olympus BX50; Japan) and a stereo-microscope (Nikon, Japan). We deposited all specimens in the algal herbarium of the National Institute of Biological Resources (NIBR) in Incheon, Korea (NIBRCL0000118 031, NIBRCL0000118090).

    To minimize potential contamination during the genetic analysis, we isolated a single filament (<0.5 cm) from the field samples. We used the DNeasy Plant Mini Kit (Qiagen, Germantown, MD, USA) to extract total genomic DNAs, according to previously described protocols (Lee et al. 2024). LSU rDNA sequences were used in previous taxonomic studies for Basicladia okamurae (e.g. Leliaert et al. 2007;Boedeker et al. 2012;Watanabe et al. 2025). Therefore, we used the partial LSU rDNA sequence as the reference sequence for the species identification. And, LSU rDNA sequences were amplified using the primer pair “C1FL/D2FL” (Leliaert et al. 2007).

    The cycling conditions of the polymerase chain reaction were the following initial denaturation at 94°C for 3 min, 40 cycles at 94°C for 30 s, 50°C for 30 s, and 72°C for 1 min, final extension at 72°C for 7 min using a Gene Amp-PCR-System-9700 (Applied Biosystems, Foster City, CA, USA). We used the AmfiXpand PCR Master Mix (GenDEPOT, Katy, TX, USA) for amplification, and sequenced the PCR products, using a commercial sequencing service (Macrogen, Seoul, Korea). We analyzed and assembled the chromatograms using the Sequencher 5.4.6 software (Gene Codes, Ann Arbor, MI, USA). For species identification, we compared the LSU rDNA sequences to the public database using BLAST search in GenBank at the National Center for Biotechnology Information (NCBI; http://blast.ncbi.nlm.nih. gov/Blast.cgi), and conducted molecular analyses using the MEGA version 6 software (Kumar et al. 2016). We applied the maximum likelihood method based on the Kimura 2-parameter model, placing Pseudocladophora horii on the outgroup. A bootstrap analysis was conducted with 1,000 replicates and numbers on branches indicate bootstrap values.

    3. RESULTS

    3.1. Morphological description of B. okamurae

    Ulvophyceae Mattox and Stewart, 1984 갈파래강

    Cladophorales Haeckel, 1894 대마디말목

    Pithophoraceae Wittrock, 1877 알마디말과

    BasicladiaHoffmann and Tilden, 1930

    녹색실말속 (국명신칭)

    Basicladia okamurae (Ueda) Garbary, 2010 녹색실말 (국명신칭)

    Basionym: Chaetomorpha okamuraeUeda 1932.

    The thalli are deep green, uniseriate, displaying unbranched filaments (Fig. 3A) with cylindrical to barrelshaped cells (Fig. 3B). Each cell is 67-144 μm and 216- 1,421 μm in width and length, at the basal and middle parts of the filament and 45-50 and 150-200 μm in width and length, at the upper part of the filament. In the upper part, the apical cell exhibits a round end, tapering toward the end (Fig. 3C). In the middle to the upper part, moniliform fertilized cells of the filament form a pointed protrusion without any cytoplasm (Fig. 3D, E) and the tip bursts, releasing spores through the opening (Fig. 3F, G). The released spores are pear-shaped at first (Fig. 3H), swimming for a while, then spinning around, and becoming round and motionless (Fig. 3I). The zoospores are 10-15, 13-20 μm in width and length, respectively, and 13.3-14.9 μm in diameter. The cells are filled with round granules.

    Specimens examined. NIBRCL0000118031, NIBRCL 0000118090; 21 Nov. 2024; Sanhocheon, Yangdeokdong, Masanhoewon-gu, Changwon-si, Gyeongsangnam- do, Korea (35.228140N, 128.584652E).

    Accession numbers. PV546362 (LSU rDNA) (DNA sequence derived from NIBRCL0000118031).

    3.2. Basicladia okamurae species identification using LSU rDNA sequences analyses

    For species identification, we sequenced a total of 584 bp LSU rDNA sequence of a freshwater green alga B. okamurae (GenBank accession number PV5463 62) collected from Sanhocheon, Changwon-si, Gyeongsangnam- do, Korea. The DNA sequence exhibited 99.8-100% similarity with those of B. okamurae deposited in GenBank (NCBI) and under 91.2% similarity with those of other species of the order Cladophorales from the BLAST search. The pairwise distance by Kimura-2 parameter model showed 0-0.2% on the intraspecific level of B. okamurae. Excepting one sample of B. okamurae from China (KU727274, 2.4%), other LSU rDNA sequences (10 samples) of B. okamurae from Korea, China, Japan and Netherlands showed 99.8-100% similarity on the intraspecific level. Moreover, LSU rDNA sequence of B. okamurae showed below 91.2% similarity with species of the order Cladophorales. In this study, we successfully identified Korean B. okamurae using LSU rDNA sequence and could add a new report on the distribution of this species in Korea for worldwide distribution of B. okamurae (Figs. 1- 3).

    4. DISCUSSION

    Basicladia okamurae (Ueda) Garbary displays pale to deep green, filamentous morphological features, which is consistent with the original description by Ueda (1932). Basicladia okamurae has long been taxonomically placed in the genus Chaetomorpha (Ueda 1932). Recent molecular phylogenetic studies have revised the taxonomic position of C. okamurae among the cladophoralean species, transferring it as a new combination, identified as B. okamurae (Hanyuda et al. 2002;Garbary 2010;Watanabe et al. 2025).

    The morphological similarity among cladophoralean species has previously led to the misidentification of these taxonomic groups (e.g. Taylor et al. 2017). DNA barcoding provides useful genetic information for species identification. Taxonomic studies, including new records and species, have contributed to revising cladophoracean algal biodiversity (Taylor et al. 2017;Lee et al. 2023). In this study, we identified a green alga B. okamurae in a Korean stream, demonstrating that an integrative approach combining morphological and molecular characteristics could allow for important taxonomic insights into the green algal flora on Korea.

    Currently, the cladophoralean algal flora of Korea included 11 genera such as Cladophora, Pithophora, Ulothrix, and Chaetomorpha (NIBR 2025). However, Basicladia species records have not been previously reported in Korea, making this finding a notable addition to the list, thereby increasing regional diversity.

    ACKNOWLEDGMENTS

    This study was supported by grants from the National Institute of Biological Resources (NIBR; grant number: NIBR202502103), funded by the Korea Ministry of Environment (MOE) and the National Fishery Products Quality Management Service (Development of Quarantine and Disease Control Program for Aquatic Life: NFQS2025001), of the Republic of Korea.

    CRediT authorship contribution statement

    EY Lee: Data curation, Investigation, Methodology, Project administration, Resources, Visualization, Writing- Original draft preparation, Funding acquisition. SJ Lee: Data curation, Investigation, Funding acquisition, Methodology, Project administration, Writing-Review & editing. SR Lee: Conceptualization, Data curation, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing-Original draft preparation.

    Declaration of Competing Interest

    The authors declare no conflicts of interest.

    Figure

    KJEB-43-3-236_F1.jpg

    Sampling site information: Sanhocheon, Yangdeok-dong, Masanhoewon-gu, Changwon-si, Gyeongsangnam-do, Korea (35.228140N, 128.584652E). (A) Overall view of the stream where samples were collected. (B) Biomass of Basicladia okamurae at the sampling site.

    KJEB-43-3-236_F2.jpg

    Molecular phylogenetic analysis using the maximum likelihood method with LSU rDNA sequences from species of the family Pithophoraceae, including Korean Basicladia okamurae.

    KJEB-43-3-236_F3.jpg

    Morphological observation of Basicladia okamurae from Korea. (A, B) Gross morphology of unbranched, cylindrical filaments. (C) Upper part of a filament with an apical cell. (D) Middle part of a filament with fertilized cells. (E) Cell forming a protrusion. (F, G) Released spores through the opening. (H) Pear-shaped spore. (I) Settled round-shaped spores. Scale bars: A. 1,000 μm, B. 200 μm, C. 50 μm, D. 50 μm, E. 50 μm, F. 50 μm, G-I. 25 μm.

    Table

    Reference

    1. Boedeker C, CJ O’Kelly, W Star and F Leliaert. 2012. Molecular phylogeny and taxonomy of the Aegagropila clade (Cladophorales, Ulvophyceae), including the description of Aegagropilopsis gen. nov. and Pseudocladophora gen. nov. J. Phycol. 48:808-825.
    2. Garbary DJ. 2010. Taxonomy of Basicladia (Cladophorales, Chlorophyta) with two new combinations. Novon 20:38-40.
    3. Guiry MD and GM Guiry. 2025. AlgaeBase. World-Wide Electronic Publication. National University of Ireland. Galway, Ireland. https://www.algaebase.org. Accessed March 7, 2025.
    4. Haeckel E. 1894. Systematische Phylogenie der Protisten und Pflanzen. Erster Theil des Entwurfs einer systematischen Stammesgeschichte. Verlag von Georg Reimer. Berlin, Germany. pp. i-xvi, 1-400.
    5. Hanyuda T, I Wakana, S Arai, K Miyaji, Y Watano and K Ueda. 2002. Phylogenetic relationships within Cladophorales (Ulvophy-ceae, Chlorophyta) inferred from 18S rRNA gene sequences with special reference to Aegagropila linnaei. J. Phycol. 38: 564-571.
    6. Hoffmann WE and JE Tilden. 1930. Basicladia, a new genus of Cladophoraceae. Bot. Gaz. 89:374-384.
    7. Kumar S, G Stecher and K Tamura. 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33:1870-1874.
    8. Lee EY, SJ Lee and SR Lee. 2024. First report of freshwater red alga Compsopogon caeruleus (Compsopogonaceae, Rhodophyta) in Korea. J. Species Res. 13:332-339.
    9. Lee SJ, HG Choi, JH Kim, EY Lee and SR Lee. 2023. Genetic diversity of Cladophora oligocladoidea forming a bloom in the coastal area of Korea. Phycol. Res. 71:77-80.
    10. Leliaert F, O De Clerck, H Verbruggen, C Boedeker and E Coppe-jans. 2007. Molecular phylogeny of the Siphonocladales (Chlorophyta: Cladophorophyceae). Mol. Phylogenet. Evol. 44: 1237-1256.
    11. Mattox KR and KD Stewart. 1984. Classification of the green algae: A concept based on comparative cytology. pp. 29-72. In: Systematics of the Green Algae Special Volume No. 27 (Irvine DEG and DM John, eds.). Academic Press. London, United Kingdom.
    12. NIBR. 2025. 2024 Biodiversity Statistics of Korea. National Institute of Biological Resources. Incheon, Korea. https://kbr.go.kr/content/view.do?menuKey=799&contentKey=174. Accessed August 3, 2025.
    13. Normandin RF and CE Taft. 1959. A new species of Basicladia from the snail Viviparus malleatus Reeve. Ohio J. Sci. 59:58- 62.
    14. Pedroche FF and A Sentíes. 2020. Diversidad de macroalgas marinas en México. Una actualización florística y nomenclatural. Cymbella 6:4-55.
    15. Taylor RL, JC Bailey and DW Freshwater. 2017. Systematics of Cladophora spp. (Chlorophyta) from North Carolina, USA, based upon morphology and DNA sequence data with a description of Cladophora subtilissima sp. nov. J. Phycol. 53:541- 556.
    16. Ueda S. 1932. New freshwater species of Chaetomorpha. J. Imp. Fish. Inst., Tokyo 27:23-24.
    17. Van den Hoek C. 1963. Revision of the European Species of Cladophora. Brill. Leiden, the Netherlands. p. 248.
    18. Watanabe T, D Tamaoki, I Karahara and Y Yamazaki. 2025. Morphological characteristics and molecular phylogeny of ‘Tateyama-marimo’ (Cladophorales) Tateyama Town, Toyama Prefecture, Japan: A comparative study with related freshwater algae. Phycol. Res. 73:17-26.
    19. Wittrock VB. 1877. On the development and systematic arrangement of the Pithophoraceae, a new order of algae. Nova Acta Reg. Soc. Sci. Upsaliensis 3:1-80, VI plates.

    Vol. 40 No. 4 (2022.12)

    Journal Abbreviation 'Korean J. Environ. Biol.'
    Frequency quarterly
    Doi Prefix 10.11626/KJEB.
    Year of Launching 1983
    Publisher Korean Society of Environmental Biology
    Indexed/Tracked/Covered By

    Contact info

    Any inquiries concerning Journal (all manuscripts, reviews, and notes) should be addressed to the managing editor of the Korean Society of Environmental Biology. Yongeun Kim,
    Korea University, Seoul 02841, Korea.
    E-mail: kyezzz@korea.ac.kr /
    Tel: +82-2-3290-3496 / +82-10-9516-1611